Procedure guide
Anal fissure surgery: sphincterotomy, botulinum toxin and what to expect
Most anal fissures heal with soft stools and creams, so surgery is for chronic fissures that have not responded. The two main choices are an injection of botulinum toxin and a small cut in the internal anal sphincter, and they differ in healing rate and in risk to control of wind or stool.
Last checked: 2026-10-03
Key facts
At a glance.
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Not first line
The NHS lists painkillers, fibre, fluids, warm baths and creams first, with creams used for up to 8 weeks.
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Surgery options
Guy's and St Thomas' describes botulinum toxin injection or lateral internal sphincterotomy, often as a day case under general anaesthetic.
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Healing
Milton Keynes gives at least 9 in 10 cured with sphincterotomy and about 70 per cent healing with botulinum toxin.
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Continence
Milton Keynes says up to 1 in 3 people have poor control of gas after sphincterotomy, and that some have soiling or mild incontinence.
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Recurrence
Plymouth says up to 3 in 10 people treated with GTN have future episodes.
Why surgery is offered, and when it is not needed
A fissure is a small tear in the skin just inside the anus, often from passing a hard stool, with sharp pain during and after a bowel movement and sometimes bright red blood. Milton Keynes explains that tightness of the internal sphincter can reduce blood flow to the tear and stop it healing, and treats a fissure that has lasted more than six weeks as chronic.
The NHS says most fissures heal alone with simple measures, and that you should see a GP if there is no improvement after seven days of self-care. Painkillers, fibre, fluids and warm baths are the first line, then prescription creams. Surgery is considered when those fail or the fissure keeps coming back, not as an early shortcut.
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Plymouth describes GTN ointment used every 12 hours for 6 to 8 weeks.
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Diltiazem cream is an alternative if GTN is not suitable.
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Lidocaine eases pain but does not promote healing.
Comparing the surgical options
Botulinum toxin is injected into the sphincter under anaesthetic to relax it temporarily. Guy's and St Thomas' notes that its use for fissures is unlicensed, though evidence supports it. Milton Keynes gives about a 70 per cent chance of healing, an effect lasting about three months, repeatable, with a risk of minor gas incontinence.
Lateral internal sphincterotomy cuts a small part of the inner sphincter muscle. Milton Keynes says at least 9 in 10 are cured and Plymouth says it reduces spasm and improves blood flow. The trade-off is permanence: Milton Keynes says up to 1 in 3 have poor control of gas, with some soiling or mild incontinence. For stubborn cases Plymouth mentions a flap procedure.
| Option | Healing figure quoted | Main drawback quoted |
|---|---|---|
| GTN ointment (not surgery) | About 7 in 10 chronic fissures cured | Headaches in up to 6 in 10; recurrence up to 3 in 10 |
| Botulinum toxin injection | About 70 per cent chance of healing | Effect lasts about 3 months; minor gas incontinence possible |
| Lateral sphincterotomy | At least 9 in 10 cured | Up to 1 in 3 have poor control of gas |
Preparing for the operation
Guy's and St Thomas' says surgery is often a day case under general anaesthetic and that a pre-assessment clinic comes first. Expect fasting instructions, a review of medicines such as blood thinners, and a chance to ask about continence risk before you consent.
Keep stools soft beforehand with fibre and fluids; Plymouth suggests around 2 litres of fluid a day and avoiding long spells on the toilet.
The day of the operation
You are asleep for either procedure, according to the NHS and Milton Keynes. In the botulinum approach, the surgeon injects the muscle; in sphincterotomy a small incision divides part of the internal muscle. Neither involves removing the fissure as such, because relieving spasm lets the tear heal.
Guy's and St Thomas' describes day surgery with same-day discharge. Ask what pain relief and stool-softening plan you will go home with, when you may bath, what bleeding to expect and when to restart blood thinners.
Risks, common and serious
The key concern is the effect on control. Milton Keynes quotes up to 1 in 3 for poor control of gas after sphincterotomy and mentions soiling or mild bowel incontinence in some. For botulinum toxin it mentions minor gas incontinence that fades as the effect wears off. General risks include bleeding, infection and pain.
Fissures can recur: Plymouth says up to 3 in 10 people who heal with GTN have repeat episodes, and Milton Keynes says further courses or surgery may be needed for frequent recurrence.
Recovery in outline
The pages retrieved give no fixed recovery periods, so timings here are qualitative: pain usually eases quickly once the sphincter spasm is relieved, and the wound heals over the following weeks. Keep stools soft, as the NHS advises, with fibre and fluids, and use warm baths to soothe; Plymouth describes 15-minute baths.
Return to work and driving depend on comfort and on any medicines you are taking. GOV.UK says you must tell the DVLA if you cannot drive three months after an operation, and that you should ask your doctor how surgery affects driving.
Warning signs and who to contact
Seek urgent help for heavy bleeding, severe or worsening pain, a fever, difficulty passing urine or a hot, tender swelling beside the anus. Report new leakage of stool or loss of control promptly to your surgical team. For less urgent concerns contact your GP or NHS 111, and call 999 for collapse.
Questions to ask your surgeon
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Which option do you suggest for me, and what are the local healing figures?
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What is my realistic risk of problems with wind or stool control?
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Is there any anal or bowel condition that changes your advice?
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What happens if the fissure does not heal?
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When will I be reviewed afterwards?
NHS and private differences
The operations are done the same way. NHS routes typically expect you to have tried creams first and may wait for a colorectal clinic slot, while private services can offer quicker access and choice of surgeon. Ask in both whether botulinum toxin is offered, as it is unlicensed for this use, and how repeat treatment is handled.
Frequently asked
Questions people ask.
Quick, plain-English answers to the questions we hear most.
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Will a fissure heal without surgery?
Often. The NHS says most heal on their own, and that creams may be applied for up to 8 weeks. Surgery is for chronic fissures that do not respond.
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How do the two operations differ?
Botulinum toxin temporarily relaxes the sphincter and wears off, while a lateral sphincterotomy cuts part of the muscle. Milton Keynes gives about 70 per cent healing and at least 9 in 10 cured respectively.
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Will I be asleep?
The NHS, Guy's and St Thomas' and Milton Keynes describe general anaesthetic, often as a day case.
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Could I lose control of wind or stool?
Milton Keynes says up to 1 in 3 have poor control of gas after sphincterotomy, with soiling or mild incontinence in some. Botulinum toxin carries minor gas incontinence risk that fades.
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Why is botulinum toxin called unlicensed?
Guy's and St Thomas' explains that the manufacturer has not specified this use, although evidence supports its effectiveness. Your surgeon should discuss this with you.
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Can the fissure return?
Yes. Plymouth says up to 3 in 10 people treated with GTN have future episodes, and Milton Keynes says repeat treatment may be needed.
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How long does botulinum toxin last?
Milton Keynes says the effect lasts about three months and can be repeated.
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What is a flap procedure?
Plymouth mentions a flap procedure for resistant fissures after other measures fail. It is a larger operation, so ask your surgeon about its risks.
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What can I do to stop fissures coming back?
Keep stools soft with fibre and about 2 litres of fluid a day, as Plymouth suggests, avoid straining and avoid long periods on the toilet.
Where this comes from
Sources and checking.
This guide is for information, not medical advice.
Your GP or consultant knows your history and can tell you which parts apply to you. If your symptoms are severe, rapidly worsening, or come with red-flag features, seek urgent medical care. Figures and availability change, so treat them as a guide and confirm with the provider.
Published 2026-10-03, next review 2027-10-03.
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NHS - Anal fissure (https://www.nhs.uk/conditions/anal-fissure/), retrieved October 2026
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Milton Keynes University Hospital NHS Foundation Trust - Anal fissure (https://www.mkuh.nhs.uk/patient-information-leaflet/anal-fissure), retrieved October 2026
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University Hospitals Plymouth NHS Trust - Anal fissure (https://www.plymouthhospitals.nhs.uk/display-pil/pil-anal-fissure-7999/), retrieved October 2026
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Guy's and St Thomas' NHS Foundation Trust - Anal fissure treatment: surgery (https://www.guysandstthomas.nhs.uk/health-information/anal-fissure-treatment/surgery), retrieved October 2026
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GOV.UK - Surgery and driving (https://www.gov.uk/surgery-and-driving), retrieved October 2026