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Newborn liver conditions

Biliary atresia in babies: symptoms, Kasai operation and outlook

Biliary atresia is a rare liver and bile duct disease that a baby is born with, where the ducts are missing, blocked or damaged and bile cannot drain from the liver. Signs include jaundice that does not clear, pale stools and dark urine in the first weeks. The Kasai operation is the main treatment and works best in the first 2 to 3 months of life.

Last checked: 2026-10-11

Key facts

At a glance.

  • What it is

    Liver UK (the Children's Liver Disease Foundation) describes it as a rare disease of the liver and bile ducts that a baby is born with, in which bile ducts are missing, incomplete, blocked or damaged.

  • How common

    Liver UK says it happens in around 1 in 10,000 to 1 in 20,000 births in the UK.

  • Early signs

    Babies usually appear well when first born. Prolonged jaundice, dark urine and pale stools usually start to appear during the first few weeks of life, says Liver UK.

  • Act on pale poo

    The NHS says to ask for an urgent GP or midwife appointment or call NHS 111 if a jaundiced baby's pee is dark yellow or brown or their poo is a pale creamy colour.

  • Treatment

    There is no medical cure, but the Kasai operation can create a new path for bile to flow, and is best done in the first 2 to 3 months of life, says Liver UK.

  • Specialist care

    King's College Hospital says it is managed in only three centres in the UK and that suspected cases should be referred to one of them.

  • Screening

    The UK National Screening Committee does not currently recommend screening newborns for biliary atresia.

What is biliary atresia?

Liver UK describes biliary atresia as a rare disease of the liver and bile ducts that presents very early in life and requires urgent treatment. In affected newborns the bile ducts are missing, incomplete, blocked or damaged, which stops the flow of bile from the liver to the gallbladder and small intestine. Bile backs up and gets trapped inside the liver, and the condition can cause serious liver damage.

Liver UK says there are several types depending on the location of the blockage and the amount of damage, that doctors think it could be caused by a mixture of things without knowing exactly why, and that there is no way to prevent it.

What are the signs of biliary atresia?

Liver UK says babies with biliary atresia usually appear well and healthy when first born, but prolonged jaundice, dark urine and pale stools (poo) usually start to appear during the first few weeks of life. The UK National Screening Committee describes early symptoms as jaundice and pale stools.

Newborn jaundice is very common and usually harmless. The NHS says for most babies with jaundice the yellow is most noticeable at around 3 days old and it usually takes around 2 weeks for the jaundice to go.

Newborn jaundice compared with possible biliary atresia, from NHS and Liver UK information
Usual newborn jaundiceSigns that need urgent checking
TimingMost noticeable around 3 days; usually gone in about 2 weeksJaundice not getting better, or getting worse
PooNormal colourPale creamy colour
UrineNormalDark yellow or brown
ActionUsually no treatment neededUrgent GP or midwife appointment or NHS 111; keep a sample of the poo to show them

When to get urgent help

The NHS says to ask for an urgent GP or midwife appointment or call NHS 111 if your baby is over 24 hours old and you think they have jaundice, if jaundice has been diagnosed and is not getting better or is getting worse, or if their pee is dark yellow or brown or their poo is a pale creamy colour. It suggests keeping a sample of the poo to show a midwife or doctor.

The NHS says to call 999 or go to A&E if a baby with jaundice is sleepier than normal or difficult to wake, is not feeding, is floppy or stiff or has jerking or twitching movements, has a high or low temperature, has not been producing wet nappies, has difficulty breathing, or is less than 24 hours old.

How is biliary atresia diagnosed?

Liver UK says tests include liver blood tests, an ultrasound scan and sometimes a liver biopsy. King's College Hospital says a diagnosis is made following blood tests and imaging, and that all suspected cases should be referred to one of the three national centres, which are King's College Hospital, Leeds Children's Hospital and Birmingham Children's Hospital.

What is the Kasai operation?

Liver UK says there is no medical cure for biliary atresia but a surgical operation called the Kasai procedure can create a new path for bile to flow from the liver. This is best done in the first 2 to 3 months of life. If a baby does not have a Kasai procedure in that time, the success rate of the operation is low, and even if it is performed early it may not always be successful.

King's College Hospital says that in most cases bile flow is restored and jaundice reduced after surgery, and these babies can be managed with outpatient follow-up, but some need further inpatient care and possibly a liver transplant. Liver UK lists complications following the Kasai procedure that may include cholangitis (infection of the bile ducts), itching, ongoing jaundice and poor growth.

Liver transplant and long-term outlook

Liver UK says that in some children liver disease can get worse and may lead to more severe complications and liver failure. It says that thanks to improved medical support and treatments, more babies with biliary atresia are growing to reach adulthood without needing a liver transplant, but that it is likely they will need a liver transplant at some point in their adult life.

NHS Blood and Transplant describes a liver transplant as a major operation in which a diseased liver is replaced by a donor liver, with assessment, a period on the waiting list if suitable (which may take several months), then the operation. King's College Hospital says that if a transplant is needed it is carried out within the same specialist service.

Is there newborn screening for biliary atresia?

The UK National Screening Committee does not recommend screening newborns for biliary atresia, because there is inconsistent evidence on the accuracy of stool colour cards as a screening test and no evidence that screened babies would be able to have surgery at a younger age than unscreened babies. It last reviewed the condition in June 2026, with the next review estimated for 2029 to 2030. This means parents and clinicians are the main safety net: check your baby's poo colour and act on prolonged jaundice.

NHS pathway and specialist centres

Biliary atresia is managed in only three centres in the UK, so care is organised through the NHS even when a baby is first seen in a local hospital. The registry of babies born with biliary atresia in England and Wales is used to assess national outcomes. If you would like a second opinion, ask the team looking after your baby how to arrange it and make sure records are shared with the specialist centre.

Frequently asked

Questions people ask.

Quick, plain-English answers to the questions we hear most.

  • What is biliary atresia?

    A rare disease of the liver and bile ducts that a baby is born with. Liver UK says the bile ducts are missing, incomplete, blocked or damaged, so bile cannot flow from the liver to the intestine and backs up inside the liver. It needs urgent treatment.

  • What are the symptoms of biliary atresia?

    Babies usually look well at first. Liver UK says prolonged jaundice, dark urine and pale stools usually start to appear during the first few weeks of life. The NHS lists dark yellow or brown pee and pale creamy poo among reasons to seek urgent advice for a jaundiced baby.

  • How long does newborn jaundice normally last?

    The NHS says jaundice in most babies is most noticeable at around 3 days old and usually takes around 2 weeks to go. Jaundice that is not getting better or is getting worse, or comes with pale poo, needs urgent advice from a GP, midwife or NHS 111.

  • How is biliary atresia diagnosed?

    With liver blood tests, an ultrasound scan and sometimes a liver biopsy, according to Liver UK. King's College Hospital says suspected cases should be referred to one of the three national specialist centres, where the diagnosis is confirmed and surgery planned.

  • What is the Kasai operation?

    A surgical operation that creates a new path for bile to flow from the liver. Liver UK says it is best done in the first 2 to 3 months of life, and that the success rate is low if it is done later. It may not always be successful even when done early.

  • Will my baby need a liver transplant?

    Not always straight away. King's College Hospital says that after the Kasai operation bile flow is restored in most cases, but some babies need further inpatient care and possibly a transplant. Liver UK says it is likely a transplant will be needed at some point in adult life.

  • Can biliary atresia be prevented?

    No. Liver UK says there is no way that biliary atresia can be prevented, and that doctors think it could be caused by a mixture of things. The most important step is to recognise the signs early and seek prompt assessment.

  • Is there newborn screening for biliary atresia?

    Not in the UK. The UK National Screening Committee does not currently recommend it, because evidence on stool colour cards is inconsistent and there is no evidence that screened babies would have surgery earlier. It reviewed this in June 2026 and expects to review it again in 2029 to 2030.

  • Where is biliary atresia treated in the UK?

    King's College Hospital says it is managed in only three UK centres: King's College Hospital in London, Leeds Children's Hospital and Birmingham Children's Hospital. A national registry of babies in England and Wales is used to assess outcomes. Your local hospital will arrange a referral.

  • What problems can happen after the Kasai operation?

    Liver UK lists cholangitis, itching, ongoing jaundice and poor growth. It says liver disease can get worse in some children, leading to more severe complications and liver failure. Regular follow-up in a specialist liver service is how these are picked up and treated.

Where this comes from

Sources and checking.

This guide is for information, not medical advice.

Your GP or consultant knows your history and can tell you which parts apply to you. If your symptoms are severe, rapidly worsening, or come with red-flag features, seek urgent medical care. Figures and availability change, so treat them as a guide and confirm with the provider.

Published 2026-10-11, next review 2027-10-11.